CDS

Accession Number TCMCG057C37654
gbkey CDS
Protein Id XP_018436540.1
Location complement(join(51584082..51584501,51584590..51584770,51584862..51585036,51585901..51586864))
Gene LOC108808929
GeneID 108808929
Organism Raphanus sativus

Protein

Length 579aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018581038.1
Definition PREDICTED: uncharacterized protein LOC108808929 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Survival motor neuron (SMN) interacting protein 1 (SIP1)
KEGG_TC -
KEGG_Module M00426        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13130        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000387        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032797        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034719        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097504        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGACGAGATCTGACTCCGATGAGTGTCTTGTGCAAGACCCACTAACCTCCTCAGAGAAAGCTTCTATCTCTCGCGAAGATTCGGCTGAAGAAGAGTCGCTAAAGGTCGTTTCTTTGTCTCCTCCACTAGAGAACGACTCTGTTGTAGAGATAAGCTCAAAGAATCAAGTAAAGTCTTCGCCTTTTGCTTCTGTTACTGAGAAAGATAGTGAGAGTATCCATCCGGATTCTGTTGAAGTTTCTTTATCTGAAGCCCAGGCTATGGATGTGGATTGTCCTGGAGTCCTCTCTGTATCTGAAGCTGCCTCCGCGTTTCTTGAACAGAACAAGGTTGGTGAGGAACTGCAACAGATCAAGGAGACCTCTGCTCTACAAGATGATGTGCACAAGATGGAGGAGACTGATGTGTCCGTTGTTTGTAAGGGACAAGAAGATTCCGATGTGCAGAGACTTTTGGAGGCTGAGAAGAGGAGACTGTTGGCTGAGATCGAAACGGGAACGATTTTCAGGAAGAAGGAAGACGTGGAGACGCTCGCTGTGGCTTCTGATTTTCATCAGAAGGTGGAGAGAGTGAGAGTCAAGGACAACGCTTTTGTTGGGAGGTCTGTGAAGATCGATGTGGTTGACGACACTGCGTTGCTCAATGTCGTTCCTTTCTGCAAGAACGGTAAAGACCATCATCATCATCCCAAGAGGTCAGGAACCGCACACGGTGATGATAAGGAAGCACCGAGGAAGCATAAGAAAACTGGAGTGAAGCATCAACATGTTGAAGCAAGTGGCGGCAAGATAATGTACTCTTTGAACCAGATGAAGTCGATGAGGTATGCTAACATGGGGAATCAGAGGAAACTGTGGAGTGACATGTACGCTAGGCTCCTACCTGAGCTGGTGAGTGAGTACGAAGGTCTAGTTAGCTTGAAGAAGATGAATCAGAAGAATTCAAAGTCGAGTGGCATCGGCACCAAAGAAGGAATGGATGATTTAACACTTGAAGAAGAAGAAGAGGAGGAAGAGTACAGTGAAGATAATGACGATTACAATAGCATTTTGAAACCTGCCTTTGAGGTTGATGGAGAACCTGATTTCGAATCTGGACCACCAGAAGATGGCTTTGAATACTTAAGACGAGTCAGGTGGGAAGCAAAGCGTGTTCCCAATGTAAAAGTAGCCAAGATAGATGAAAGCAAGTACATAACGAAAGAGCAAAGTGTCTACATGCCACAGATACCTGAAATCCCCAAATGCCCAGAGCACTTATTACCACTCAAGGAATGGGAAGACTCATTGCTTTCTGACTTCTCACATCTTCGCCTGGCTTTATCACAAACTGACAACAACTTCTTCGGTGACGAGATCATGTCATCAAGTCCGTCTACAGAGTATATGCTTATGGGGATGTTCAGTACACGTCTCAACACGGTTACAGACGAGTCATTTGGTGTGGTGGTTTCCGAAATACAAGGAATGGACTCGGTGACGCGGGTATCAAGGCTGAAAAAGAGGATATGTTTGGTTGAGAAGGAGAGCGGTTTACAGGGCAGTGACTGTATATGGGTAGTAGCATTGTGTGCATCGGTGGACACTCCTTTGGATGGTGATACTTGTGCTTGTCTCAGGGCTCTTCTGAGGAAGTGTGCGAGTGTTCGTGCGTTGGAGGTTGAAGATGAACAAGTCATCATCATGGCAAATATGCTCATCACCATCGCAGGCAGATATTTTGGCCAAATGGAATAA
Protein:  
MTTRSDSDECLVQDPLTSSEKASISREDSAEEESLKVVSLSPPLENDSVVEISSKNQVKSSPFASVTEKDSESIHPDSVEVSLSEAQAMDVDCPGVLSVSEAASAFLEQNKVGEELQQIKETSALQDDVHKMEETDVSVVCKGQEDSDVQRLLEAEKRRLLAEIETGTIFRKKEDVETLAVASDFHQKVERVRVKDNAFVGRSVKIDVVDDTALLNVVPFCKNGKDHHHHPKRSGTAHGDDKEAPRKHKKTGVKHQHVEASGGKIMYSLNQMKSMRYANMGNQRKLWSDMYARLLPELVSEYEGLVSLKKMNQKNSKSSGIGTKEGMDDLTLEEEEEEEEYSEDNDDYNSILKPAFEVDGEPDFESGPPEDGFEYLRRVRWEAKRVPNVKVAKIDESKYITKEQSVYMPQIPEIPKCPEHLLPLKEWEDSLLSDFSHLRLALSQTDNNFFGDEIMSSSPSTEYMLMGMFSTRLNTVTDESFGVVVSEIQGMDSVTRVSRLKKRICLVEKESGLQGSDCIWVVALCASVDTPLDGDTCACLRALLRKCASVRALEVEDEQVIIMANMLITIAGRYFGQME